Institut Charles Sadron Membre

Fabrice Thalmann

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  • Equipe : MCUBE
Publications

2023

Journal articles

titre
Rotational and translational drags of a Janus particle close to a wall and a lipid membrane
auteur
Vaibhav Sharma, Florent Fessler, Fabrice Thalmann, Carlos Marques, Antonio Stocco
article
Journal of Colloid and Interface Science, 2023, 652, pp.2159-2166. ⟨10.1016/j.jcis.2023.09.026⟩
Resume_court
Hypothesis: Measuring rotational and translational Brownian motion of single spherical particles rev .....
typdoc
Journal articles
DOI
DOI : 10.1016/j.jcis.2023.09.026
Accès au texte intégral et bibtex
https://hal.science/hal-04212110/file/SharmaStoccoJCIS2023revNOHL3.pdf BibTex

2022

Journal articles

titre
Stress overshoot, hysteresis, and the Bauschinger effect in sheared dense colloidal suspensions
auteur
Dmytro Kushnir, Céline Ruscher, Eckhard Bartsch, Fabrice Thalmann, Pascal Hebraud
article
Physical Review E , 2022, 106 (3), pp.034611. ⟨10.1103/PhysRevE.106.034611⟩
Resume_court
The mechanical non-linear response of dense Brownian suspensions of polymer gel particles is studied .....
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Journal articles
DOI
DOI : 10.1103/PhysRevE.106.034611
Accès au texte intégral et bibtex
https://hal.science/hal-04310768/file/Dmytro_PRE_Bauschinger.pdf BibTex
titre
Perturbing the catenoid: stability and mechanical properties of non-axisymmetric minimal surfaces
auteur
Friedrich Walzel, Alice Requier, Kevin Boschi, Jean Farago, Philippe Fuchs, Fabrice Thalmann, Wiebke Drenckhan, Pierre Muller, Thierry Charitat
article
Physical Review E , 2022, 106 (1), pp.014803. ⟨10.1103/PhysRevE.106.014803⟩
Resume_court
Minimal surface problems arise naturally in many soft matter systems whose free energies are dominat .....
typdoc
Journal articles
DOI
DOI : 10.1103/PhysRevE.106.014803
Accès au texte intégral et bibtex
https://hal.science/hal-03710843/file/2203.16140.pdf BibTex

2021

Journal articles

titre
Rheology of sliding leaflets in coarse-grained DSPC lipid bilayers
auteur
Othmene Benazieb, Claire Loison, Fabrice Thalmann
article
Physical Review E , 2021, 104 (5), pp.054802. ⟨10.1103/PhysRevE.104.054802⟩
Resume_court
Amphiphilic lipid bilayers modify the friction properties of the surfaces on top of which they are d .....
typdoc
Journal articles
DOI
DOI : 10.1103/PhysRevE.104.054802
Accès au texte intégral et bibtex
https://hal.science/hal-03016981/file/2007.05784.pdf BibTex
titre
Ripple-like instability in the simulated gel phase of finite size phosphocholine bilayers
auteur
Vivien Walter, Céline Ruscher, Adrien Gola, Carlos M Marques, Olivier Benzerara, Fabrice Thalmann
article
Biochimica et Biophysica Acta:Biomembranes, 2021, 1863 (11), pp.183714. ⟨10.1016/j.bbamem.2021.183714⟩
Resume_court
Atomistic molecular dynamics simulations have reached a degree of maturity that makes it possible to .....
typdoc
Journal articles
DOI
DOI : 10.1016/j.bbamem.2021.183714
Accès au texte intégral et bibtex
https://hal.science/hal-03442327/file/walter_ripple_phase.pdf BibTex
titre
Molecular organization in hydroperoxidized POPC bilayers
auteur
Helena Junqueira, André Pierre Schroder, Fabrice Thalmann, Andrey Klymchenko, Yves Mély, Mauricio S Baptista, Carlos M Marques
article
Biochimica et Biophysica Acta:Biomembranes, 2021, 1863 (10), pp.183659. ⟨10.1016/j.bbamem.2021.183659⟩
typdoc
Journal articles
DOI
DOI : 10.1016/j.bbamem.2021.183659
Accès au texte intégral et bibtex
https://hal.science/hal-03379156/file/Junqueira_FINAL.pdf BibTex
titre
MLLPA: A Machine Learning-assisted Python module to study phase-specific events in lipid membranes
auteur
Vivien Walter, Céline Ruscher, Olivier Benzerara, Fabrice Thalmann
article
Journal of Computational Chemistry, 2021, ⟨10.1002/jcc.26508⟩
Resume_court
MLLPA is a new Python 3 module developed to analyse phase domains in a lipid membrane based on lipid .....
typdoc
Journal articles
DOI
DOI : 10.1002/jcc.26508
Accès au texte intégral et bibtex
https://hal.science/hal-03597389/file/Walter_MLLPA.pdf BibTex
titre
Accumulation of styrene oligomers alters lipid membrane phase order and miscibility
auteur
Mattia Morandi, Monika Kluzek, Jean Wolff, André Pierre Schroder, Fabrice Thalmann, Carlos Marques
article
Proceedings of the National Academy of Sciences of the United States of America, 2021, 118 (4), pp.e2016037118. ⟨10.1073/pnas.2016037118⟩
Resume_court
Growth of plastic waste in the natural environment, and in particular in the oceans, has raised the .....
typdoc
Journal articles
DOI
DOI : 10.1073/pnas.2016037118
Accès au texte intégral et bibtex
https://hal.science/hal-03406176/file/morandi_styrene_main.pdf BibTex

2020

Journal articles

titre
A machine learning study of the two states model for lipid bilayer phase transitions
auteur
Carlos M. Marques, Fabrice Thalmann, Vivien Walter, Céline Ruscher, Olivier Benzarara
article
Physical Chemistry Chemical Physics, 2020, 22 (34), pp.19147-19154. ⟨10.1039/D0CP02058C⟩
typdoc
Journal articles
DOI
DOI : 10.1039/D0CP02058C
Accès au texte intégral et bibtex
https://hal.science/hal-03101032/file/ML_arXiv.pdf BibTex
titre
Coarse-Grain Simulations of Solid Supported Lipid Bilayers with Varying Hydration Levels
auteur
Florian Benedetti, Li Fu, Fabrice Thalmann, Thierry Charitat, Anne Rubin, Claire Loison
article
Journal of Physical Chemistry B, 2020, 124 (38), pp.8287-8298. ⟨10.1021/acs.jpcb.0c03913⟩
Resume_court
Supported lipid bilayers (SLBs) are a very popular system for the study of biomimetic membranes. Und .....
typdoc
Journal articles
DOI
DOI : 10.1021/acs.jpcb.0c03913
Accès au texte intégral et bibtex
https://hal.science/hal-02973275/file/preprint_Benedetti.pdf BibTex
titre
Fluid bilayer phase in aqueous mixtures of fatty alcohol and cationic surfactant
auteur
Tiago Espinosa, Fabien Leonforte, Luc Nicolas-Morgantini, Anne-Laure Fameau, Bernard Querleux, Fabrice Thalmann, Carlos M. Marques
article
Physical Review Research, 2020, 2 (1), pp.013075. ⟨10.1103/PhysRevResearch.2.013075⟩
Resume_court
Lamellar gel networks are creamy formulations extensively used in cosmetics and pharmaceutics. The b .....
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Journal articles
DOI
DOI : 10.1103/PhysRevResearch.2.013075
Accès au texte intégral et bibtex
https://hal.science/hal-03101042/file/L_alpha_in_fatty_alcohols.pdf BibTex

Preprints, Working Papers, ...

titre
A machine learning assessment of the two states model for lipid bilayer phase transitions
auteur
Viven Walter, Céline Ruscher, Olivier Benzerara, Carlos M. Marques, Fabrice Thalmann
article
2020
Resume_court
We have adapted a set of classification algorithms, also known as Machine Learning, to the identific .....
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Preprints, Working Papers, ...
Accès au bibtex
https://arxiv.org/pdf/1907.05788 BibTex

2019

Journal articles

titre
Interaction of Giant Unilamellar Vesicles with the Surface Nanostructures on Dragonfly Wings
auteur
Samuel Cheeseman, Vi Khanh Truong, Vivien Walter, Fabrice Thalmann, Carlos M. Marques, Eric Hanssen, Jitraporn Vongsvivut, Mark J Tobin, Vladimir Baulin, Saulius Juodkazis, Shane Maclaughlin, Gary Bryant, Russell J Crawford, Elena A. Ivanova
article
Langmuir, 2019, 35 (6), pp.2422-2430. ⟨10.1021/acs.langmuir.8b03470⟩
Resume_court
The waxy epicuticle of dragonfly wings contains a unique nanostructured pattern that exhibits bacter .....
typdoc
Journal articles
DOI
DOI : 10.1021/acs.langmuir.8b03470
Accès au bibtex
BibTex
titre
Coarse-Grained Model of Oxidized Membranes and Their Interactions with Nanoparticles of Various Degrees of Hydrophobicity
auteur
Chan-Fei Su, Holger Merlitz, Fabrice Thalmann, Carlos M. Marques, Jens-Uwe Sommer
article
Journal of Physical Chemistry C, 2019, 123 (11), pp.6839-6848. ⟨10.1021/acs.jpcc.8b11909⟩
Resume_court
We investigate the consequences of lipid peroxidation on the permeation properties of membranes comp .....
typdoc
Journal articles
DOI
DOI : 10.1021/acs.jpcc.8b11909
Accès au bibtex
BibTex

2018

Journal articles

titre
Velocity of lateral drying fronts in film formation by drying of colloidal dispersions. A 2D simulation
auteur
M. Nassar, A. Gromer, F. Thalmann, P. Hébraud, Y. Holl
article
Journal of Colloid and Interface Science, 2018, 511, pp.424-433. ⟨10.1016/j.jcis.2017.10.010⟩
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Journal articles
DOI
DOI : 10.1016/j.jcis.2017.10.010
Accès au bibtex
BibTex
titre
Permeability of DOPC bilayers under photoinduced oxidation: Sensitivity to photosensitizer
auteur
Isabel O L Bacellar, Mauricio S Baptista, Helena C Junqueira, Mark Wainwright, Fabrice Thalmann, Carlos M. Marques, André P Schroder
article
Biochimica et Biophysica Acta:Biomembranes, 2018, 1860 (11), pp.2366-2373. ⟨10.1016/j.bbamem.2018.06.001⟩
Resume_court
The modification of lipid bilayer permeability is one of the most striking yet poorly understood phy .....
typdoc
Journal articles
DOI
DOI : 10.1016/j.bbamem.2018.06.001
Accès au texte intégral et bibtex
https://hal.science/hal-02126589/file/bacellar_do15%2520accepted%2520version%2520BBA.pdf BibTex
titre
DPPC Bilayers in Solutions of High Sucrose Content
auteur
Mattia Morandi, Mathieu Sommer, Monika Kluzek, Fabrice Thalmann, André P. Schroder, Carlos M. Marques
article
Biophysical Journal, 2018, 114 (9), pp.2165-2173. ⟨10.1016/j.bpj.2018.04.003⟩
Resume_court
The properties of lipid bilayers in sucrose solutions have been intensely scrutinized over recent de .....
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Journal articles
DOI
DOI : 10.1016/j.bpj.2018.04.003
Accès au bibtex
BibTex
titre
Kinetic evolution of DOPC lipid bilayers exposed to α-cyclodextrins
auteur
Monika Kluzek, Marc Schmutz, Carlos M. Marques, Fabrice Thalmann
article
Soft Matter, 2018, 14 (28), pp.5800-5810. ⟨10.1039/C8SM01013G⟩
Resume_court
Cyclodextrins are cyclic oligosaccharides capable of forming inclusion complexes with a variety of m .....
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Journal articles
DOI
DOI : 10.1039/C8SM01013G
Accès au bibtex
BibTex

2017

Journal articles

titre
Simulation of Vertical Surfactant Distributions in Drying Latex Films
auteur
A. Gromer, F. Thalmann, P. Hébraud, Y. Holl
article
Langmuir, 2017, 33 (2), pp.561-572. ⟨10.1021/acs.langmuir.6b03913⟩
typdoc
Journal articles
DOI
DOI : 10.1021/acs.langmuir.6b03913
Accès au texte intégral et bibtex
https://hal.science/hal-03586467/file/latex_surfactant_hal.pdf BibTex
titre
Horizontal drying fronts in films of colloidal dispersions: influence of hydrostatic pressure and collective diffusion
auteur
M. Nassar, A. Gromer, D. Favier, F. Thalmann, P. Hébraud, Y. Holl
article
Soft Matter, 2017, 13 (48), pp.9162-9173. ⟨10.1039/C7SM01334E⟩
Resume_court
The origin and time evolution of heterogeneities in drying colloidal films is still a matter of deba .....
typdoc
Journal articles
DOI
DOI : 10.1039/C7SM01334E
Accès au texte intégral et bibtex
https://hal.science/hal-03586510/file/Nassar_1D_simulations_hal.pdf BibTex
titre
Influence of a pH-sensitive polymer on the structure of monoolein cubosomes
auteur
Monika Kluzek, Arwen Tyler, Shiqi Wang, Rongjun Chen, Carlos Marques, Fabrice Thalmann, John Seddon, Marc Schmutz
article
Soft Matter, 2017, 13 (41), pp.7571-7577. ⟨10.1039/C7SM01620D⟩
Resume_court
Cubosomes consist in submicron size particles of lipid bicontinuous cubic phases stabilized by surfa .....
typdoc
Journal articles
DOI
DOI : 10.1039/C7SM01620D
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Conference papers

titre
La Nuit des ondes gravitationnelles : a multi-site outreach event about gravitational waves
auteur
Nicolas Arnaud, Caroline Andreazza, Marie Lauvergeon-Gourdon, Sophie Rémy, Fabrice Thalmann, Guy Wormser, Loïc Bommersbach, Jonathan Braine, Eric Chassande-Motin, Christophe Chatelain, Arnaud Cuisset, Jérôme Degallaix, Samuel Deléglise, Sophie Félix, Valérie Frois, Titaina Gibert, Julien Guillaume, Daniel Hennequin, Stavros Katsanevas, Fabien Kéfélian, Frédérique Marion, Séverine Pérus, David Smith, Simon Villain-Guillot
article
The European Physical Society Conference on High Energy Physics (EPS-HEP) 2017, Jul 2017, Venise, Italy
Resume_court
On Monday March 20th 2017, an outreach event dedicated to the gravitational waves and their recent d .....
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Conference papers
Accès au bibtex
BibTex

2016

Journal articles

titre
Peroxidised phospholipid bilayers: insight from coarse-grained molecular dynamics simulations
auteur
Yachong Guo, Vladimir Baulin, Fabrice Thalmann
article
Soft Matter, 2016, 12 (1), pp.263-271. ⟨10.1039/C5SM01350J⟩
Resume_court
An original coarse-grained model for peroxidised phospholipids is presented, based on the MARTINI li .....
typdoc
Journal articles
DOI
DOI : 10.1039/C5SM01350J
Accès au texte intégral et bibtex
https://hal.science/hal-03529878/file/guo_thalmann_peroxides_v3.pdf BibTex

2015

Journal articles

titre
Simulation of Latex Film Formation Using a Cell Model in Real Space: Vertical Drying
auteur
A. Gromer, M. Nassar, F. Thalmann, P. Hébraud, Y. Holl
article
Langmuir, 2015, 31 (40), pp.10983-10994. ⟨10.1021/acs.langmuir.5b02845⟩
typdoc
Journal articles
DOI
DOI : 10.1021/acs.langmuir.5b02845
Accès au bibtex
BibTex

2014

Journal articles

titre
Two-dimensional polymeric liquids and polymer stars: learning from conflicting theories
auteur
Albert Johner, Fabrice Thalmann, Jörg Baschnagel, Hendrik Meyer, Sergei Obukhov, Joachim Wittmer
article
Journal of Statistical Mechanics: Theory and Experiment, 2014, 2014 (4), pp.P04024. ⟨10.1088/1742-5468/2014/04/P04024⟩
Resume_court
We discuss systems for which two carefully derived, yet conflicting, theories coexisted. Dense polym .....
typdoc
Journal articles
DOI
DOI : 10.1088/1742-5468/2014/04/P04024
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BibTex
titre
Physical Damage on Giant Vesicles Membrane as a Result of Methylene Blue Photoirradiation
auteur
Omar Mertins, Isabel o.L. Bacellar, Fabrice Thalmann, Carlos m. Marques, Maurício s. Baptista, Rosangela Itri
article
Biophysical Journal, 2014, 106 (1), pp.162-171. ⟨10.1016/j.bpj.2013.11.4457⟩
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Journal articles
DOI
DOI : 10.1016/j.bpj.2013.11.4457
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BibTex

2011

Journal articles

titre
Lipid bilayer adhesion on sparse DNA carpets: Theoretical analysis of membrane deformations induced by single-end-grafted polymers
auteur
F. Thalmann, V. Billot, C. Marques
article
Physical Review E : Statistical, Nonlinear, and Soft Matter Physics, 2011, 83 (6), pp.061922. ⟨10.1103/PhysRevE.83.061922⟩
Resume_court
We consider a single end-grafted polymer chain covered by a membrane in contact with a flat and rigi .....
typdoc
Journal articles
DOI
DOI : 10.1103/PhysRevE.83.061922
Accès au texte intégral et bibtex
https://hal.science/hal-03586246/file/bubble_theory_hal.pdf BibTex
titre
Thermodynamic Approach to Phase Coexistence in Ternary Phospholipid-Cholesterol Mixtures
auteur
Jean Wolff, Carlos Marques, Fabrice Thalmann
article
Physical Review Letters, 2011, 106, pp.128104. ⟨10.1103/PhysRevLett.106.128104⟩
Resume_court
We introduce a simple and predictive model for determining the phase stability of ternary phospholip .....
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Journal articles
DOI
DOI : 10.1103/PhysRevLett.106.128104
Accès au texte intégral et bibtex
https://hal.science/hal-00581246/file/wolff_gibbs.pdf BibTex

2010

Journal articles

titre
Enhanced shear separation for chiral magnetic colloidal aggregates
auteur
C. Mendoza, C. Marques, F. Thalmann
article
Physical Review E : Statistical, Nonlinear, and Soft Matter Physics, 2010, 82 (6), pp.060401. ⟨10.1103/PhysRevE.82.060401⟩
Resume_court
We study the designing principles of the simplest colloidal propeller, an architecture built from fo .....
typdoc
Journal articles
DOI
DOI : 10.1103/PhysRevE.82.060401
Accès au bibtex
https://arxiv.org/pdf/1011.1488 BibTex
titre
Scraping and Stapling of End-Grafted DNA Chains by a Bioadhesive Spreading Vesicle to Reveal Chain Internal Friction and Topological Complexity
auteur
Gi-Moon Nam, Marie Laure Hisette, Yuting Liang Sun, Thomas Gisler, Albert Johner, Fabrice Thalmann, André Schroder, Carlos Marques, Nam-Kyung Lee
article
Physical Review Letters, 2010, 105 (8), ⟨10.1103/PhysRevLett.105.088101⟩
Resume_court
Stained end-grafted DNA molecules about 20 μm long are scraped away and stretched out by the spread .....
typdoc
Journal articles
DOI
DOI : 10.1103/PhysRevLett.105.088101
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BibTex
titre
Surfactant Distribution in Waterborne Acrylic Films. 1. Bulk Investigation
auteur
Céline Arnold, Fabrice Thalmann, Carlos Marques, Pascal Marie, Yves Holl
article
Journal of Physical Chemistry B, 2010, 114 (28), pp.9135-9147. ⟨10.1021/jp103347n⟩
Resume_court
The distribution of an anionic surfactant, sodium dodecyl sulfate (SDS), in waterborne acrylic films .....
typdoc
Journal articles
DOI
DOI : 10.1021/jp103347n
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BibTex
titre
A schematic model for molecular affinity and binding with Ising variables
auteur
Fabrice Thalmann
article
European Physical Journal E: Soft matter and biological physics, 2010, 31 (4), pp.441-454. ⟨10.1140/epje/i2010-10600-9⟩
Resume_court
After discussing the relevance of statistical physics in molecular recognition processes, we present .....
typdoc
Journal articles
DOI
DOI : 10.1140/epje/i2010-10600-9
Accès au texte intégral et bibtex
https://hal.science/hal-03538141/file/thalmann-E09121-hal.pdf BibTex

2009

Journal articles

titre
Fast algorithms for classical X→0 diffusion-reaction processes
auteur
Fabrice Thalmann, Nam-Kyung Lee
article
J Chem Phys, 2009, 130 (7), pp.074102. ⟨10.1063/1.3072706⟩
Resume_court
The Doi formalism treats a reaction-diffusion process as a quantum many-body problem. We use this se .....
typdoc
Journal articles
DOI
DOI : 10.1063/1.3072706
Accès au bibtex
https://arxiv.org/pdf/1004.1090 BibTex
titre
Fast algorithms for classical X—>0 diffusion-reaction processes
auteur
Fabrice Thalmann, Nam-Kyung Lee
article
The Journal of Chemical Physics, 2009, 130 (7), pp.074102
typdoc
Journal articles
Accès au bibtex
https://arxiv.org/pdf/1004.1090 BibTex

2008

Journal articles

titre
Measuring the Kinetics of Biomolecular Recognition with Magnetic Colloids
auteur
Laetitia Cohen-Tannoudji, Emanuel Bertrand, Jean Baudry, Caroline Robic, Cécile Goubault, Marie Pellissier, Albert Johner, Fabrice Thalmann, Nam-Kyung Lee, Carlos M. Marques, Jérôme Bibette
article
Physical Review Letters, 2008, 100, pp.108301. ⟨10.1103/PhysRevLett.100.108301⟩
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Journal articles
DOI
DOI : 10.1103/PhysRevLett.100.108301
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titre
Ligand-Receptor Interactions in Chains of Colloids: When Reactions Are Limited by Rotational Diffusion
auteur
Nam-Kyung Lee, Albert Johner, Fabrice Thalmann, Laetitia Cohen-Tannoudji, Emanuel Bertrand, Jean Baudry, Jérôme Bibette, Carlos M. Marques
article
Langmuir, 2008, 24, pp.1296. ⟨10.1021/la701639n⟩
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Journal articles
DOI
DOI : 10.1021/la701639n
Accès au bibtex
BibTex

2007

Journal articles

titre
Collision induced spatial organization of microtubules
auteur
Vladimir A. Baulin, Carlos M. Marques, Fabrice Thalmann
article
Biophysical Chemistry, 2007, 128 (2-3), pp.231. ⟨10.1016/j.bpc.2007.04.009⟩
Resume_court
The dynamic behavior of microtubules in solution can be strongly modified by interactions with walls .....
typdoc
Journal articles
DOI
DOI : 10.1016/j.bpc.2007.04.009
Accès au texte intégral et bibtex
https://hal.science/hal-00501663/file/PEER_stage2_10.1016%252Fj.bpc.2007.04.009.pdf BibTex
titre
Trotter derivation of algorithms for Brownian and Dissipative Particle Dynamics.
auteur
F. Thalmann, J. Farago
article
The Journal of Chemical Physics, 2007, 127 (12), ⟨10.1063/1.2764481⟩
typdoc
Journal articles
DOI
DOI : 10.1063/1.2764481
Accès au bibtex
https://arxiv.org/pdf/0709.0162 BibTex

2003

Journal articles

titre
Predictions and statistics of pseudoknots in RNA structures using exactly clustered stochastic simulations.
auteur
A. Xayaphoummine, T. Bucher, F. Thalmann, H. Isambert
article
Proceedings of the National Academy of Sciences of the United States of America, 2003, 100 ((26)), pp.15310-15315
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Journal articles
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BibTex

1998

Journal articles

titre
Activated drift motion of a classical particle with a dynamical pinning effect
auteur
F. Thalmann
article
The European Physical Journal B: Condensed Matter and Complex Systems, 1998, 3 (4), pp.497-505. ⟨10.1007/s100510050340⟩
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Journal articles
DOI
DOI : 10.1007/s100510050340
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BibTex

2023

Sharma, V.; Fessler, F.; Thalmann, F.; Marques, C.M.; Stocco, A. (2023), Rotational and translational drags of a Janus particle close to a wall and a lipid membrane,Journal Of Colloid And Interface Science,652(B) : 2159-2166 link

2022

Zhang, Y.; Liu, D.; Zhang, Y.; Guo, Y.; Li, W.; Thalmann, F. (2022), Coarse-grained description of monounsaturated peroxidized phospholipid bilayers,Journal Of Chemical Physics,157(8) : link

Walzel, F.; Requier, A.; Boschi, K.; Farago, J.; Fuchs, P.; Thalmann, F.; Drenckhan, W.; Muller, P.; Charitat, T. (2022), Perturbing the catenoid: Stability and mechanical properties of nonaxisymmetric minimal surfaces,Physical Review E,106(1) : link

2021

Benazieb, O.; Loison, C.; Thalmann, F. (2021), Rheology of sliding leaflets in coarse-grained DSPC lipid bilayers,Physical Review E,104(5) : link

Walter, V.; Ruscher, C.; Gola, A.; Marques, C.M.; Benzerara, O.; Thalmann, F. (2021), Ripple-like instability in the simulated gel phase of finite size phosphocholine bilayers,Biochimica Et Biophysica Acta-Biomembranes,1863(11) : link

Junqueira, H.; Schroder, A.P.; Thalmann, F.; Klymchenko, A.; Mely, Y.; Baptista, M.S.; Marques, C.M. (2021), Molecular organization in hydroperoxidized POPC bilayers,Biochimica Et Biophysica Acta-Biomembranes,1863(10) : link

Walter, V.; Ruscher, C.; Benzerara, O.; Thalmann, F. (2021), MLLPA: A Machine Learning-assisted Python module to study phase-specific events in lipid membranes,Journal Of Computational Chemistry,42(13) : 930-943 link

Morandi, I.M.; Kluzek, M.; Wolff, J.; Schroder, A.; Thalmann, F.; Marques, C.M. (2021), Accumulation of styrene oligomers alters lipid membrane phase order and miscibility,Proceedings Of The National Academy Of Sciences Of The United States Of America,118(4) : link

2020

Walter, V.; Ruscher, C.; Benzerara, O.; Marques, C.M.; Thalmann, F. (2020), A machine learning study of the two states model for lipid bilayer phase transitions,Physical Chemistry Chemical Physics,22(34) : 19147-19154 link

Benedetti, F.; Fu, L.; Thalmann, F.; Charitat, T.; Rubin, A.; Loison, C. (2020), Coarse-Grain Simulations of Solid Supported Lipid Bilayers with Varying Hydration Levels,Journal Of Physical Chemistry B,124(38) : 8287-8298 link

de Oliveira, T.E.; Leonforte, F.; Nicolas-Morgantini, L.; Fameau, A.-L.; Querleux, B.; Thalmann, F.; Marques, C.M. (2020), Fluid bilayer phase in aqueous mixtures of fatty alcohol and cationic surfactant,Physical Review Research,2(1) : link

2019

Su, C.-F.; Merlitz, H.; Thalmann, F.; Marques, C.; Sommer, J.-U. (2019), Coarse-Grained Model of Oxidized Membranes and Their Interactions with Nanoparticles of Various Degrees of Hydrophobicity,Journal Of Physical Chemistry C,123(11) : 6839-6848 link

Cheeseman, S.; Truong, V.K.; Walter, V.; Thalmann, F.; Marques, C.M.; Hanssen, E.; Vongsvivut, J.; Tobin, M.J.; Baulin, V.A.; Juodkazis, S.; Maclaughlin, S.; Bryant, G.; Crawford, R.J.; Ivanova, E.P. (2019), Interaction of Giant Unilamellar Vesicles with the Surface Nanostructures on Dragonfly Wings,Langmuir,35(6) : 2422-2430 link

Morandi, M.I.; Thalmann, F.J.; Kluzek, M.; Schroder, A.P.; Marques, C.M. (2019), DPPC Lipid Melting Transition in Concentrated Sucrose Solutions,Biophysical Journal,116(3, 1) : 79 link

2018

Bacellar, I.O.L.; Baptista, M.S.; Junqueira, H.C.; Wainwright, M.; Thalmann, F.; Marques, C.M.; Schroder, A.P. (2018), Permeability of DOPC bilayers under photoinduced oxidation: Sensitivity to photosensitizer,Biochimica Et Biophysica Acta-Biomembranes,1860(11) : 2366-2373 link

Kluzek, M.; Schmutz, M.; Marques, C.M.; Thalmann, F. (2018), Kinetic evolution of DOPC lipid bilayers exposed to alpha-cyclodextrins,Soft Matter,14(28) : 5800-5810 link

Morandi, I.M.; Sommer, M.; Kluzek, M.; Thalmann, F.; Schroder, A.P.; Marques, C.M. (2018), DPPC Bilayers in Solutions of High Sucrose Content,Biophysical Journal,114(9) : 2165-2173 link

Nassar, M.; Gromer, A.; Thalmann, F.; Hebraud, P.; Holl, Y. (2018), Velocity of lateral drying fronts in film formation by drying of colloidal dispersions. A 2D simulation,Journal Of Colloid And Interface Science,511() : 424-433 link

2017

Nassar, M.; Gromer, A.; Favier, D.; Thalmann, F.; Hebraud, P.; Holl, Y. (2017), Horizontal drying fronts in films of colloidal dispersions: influence of hydrostatic pressure and collective diffusion,Soft Matter,13(48) : 9162-9173 link

Harlepp, S.; Thalmann, F.; Follain, G.; Goetz, J.G. (2017), Hemodynamic forces can be accurately measured in vivo with optical tweezers,Molecular Biology Of The Cell,28(23, Si) : 3252-3260 link

Kluzek, M.; Tyler, A.I.I.; Wang, S.; Chen, R.; Marques, C.M.; Thalmann, F.; Seddon, J.M.; Schmutz, M. (2017), Influence of a pH-sensitive polymer on the structure of monoolein cubosomes,Soft Matter,13(41) : 7571-7577 link

Gromer, A.; Thalmann, F.; Hebraud, P.; Holl, Y. (2017), Simulation of Vertical Surfactant Distributions in Drying Latex Films,Langmuir,33(2) : 561-572 link

Kluzek, M.; Thalmann, F.; Schmutz, M.; Marques, C. (2017), Ring and Tails: Exploring the Intimacy of Cyclodextrin - Membrane Interactions,Biophysical Journal,112(3, 1) : 223 link

2016

Guo, Y.; Baulin, V.A.; Thalmann, F. (2016), Peroxidised phospholipid bilayers: insight from coarse-grained molecular dynamics simulations,Soft Matter,12(1) : 263-271 link

2015

Gromer, A.; Nassar, M.; Thalmann, F.; Hebraud, P.; Holl, Y. (2015), Simulation of Latex Film Formation Using a Cell Model in Real Space: Vertical Drying,Langmuir,31(40) : 10983-10994 link

2014

Johner, A.; Thalmann, F.; Baschnagel, J.; Meyer, H.; Obukhov, S.; Wittmer, J.P. (2014), Two-dimensional polymeric liquids and polymer stars: learning from conflicting theories,Journal Of Statistical Mechanics-Theory And Experiment,() : link

Mertins, O.; Bacellar, I.O.L.; Thalmann, F.; Marques, C.M.; Baptista, M.S.; Itri, R. (2014), Physical Damage on Giant Vesicles Membrane as a Result of Methylene Blue Photoirradiation,Biophysical Journal,106(1) : 162-171 link

2011

Thalmann, F.; Billot, V.; Marques, C.M. (2011), Lipid bilayer adhesion on sparse DNA carpets: Theoretical analysis of membrane deformations induced by single-end-grafted polymers,Physical Review E,83(6, 1) : link

Wolff, J.; Marques, C.M.; Thalmann, F. (2011), Thermodynamic Approach to Phase Coexistence in Ternary Phospholipid-Cholesterol Mixtures,Physical Review Letters,106(12) : link

2010

Mendoza, C.I.; Marques, C.M.; Thalmann, F. (2010), Enhanced shear separation for chiral magnetic colloidal aggregates,Physical Review E,82(6, 1) : link

Nam, G.; Hisette, M.L.; Sun, Y.L.; Gisler, T.; Johner, A.; Thalmann, F.; Schroeder, A.P.; Marques, C.M.; Lee, N.-K. (2010), Scraping and Stapling of End-Grafted DNA Chains by a Bioadhesive Spreading Vesicle to Reveal Chain Internal Friction and Topological Complexity,Physical Review Letters,105(8) : link

Arnold, C.; Thalmann, F.; Marques, C.; Marie, P.; Holl, Y. (2010), Surfactant Distribution in Waterborne Acrylic Films. 1. Bulk Investigation,Journal Of Physical Chemistry B,114(28) : 9135-9147 link

Thalmann, F. (2010), A schematic model for molecular affinity and binding with Ising variables,European Physical Journal E,31(4) : 441-454 link

2009

Thalmann, F.; Lee, N.-K. (2009), Fast algorithms for classical X -> 0 diffusion-reaction processes,Journal Of Chemical Physics,130(7) : link

2008

Cohen-Tannoudji, L.; Bertrand, E.; Baudry, J.; Robic, C.; Goubault, C.; Pellissier, M.; Johner, A.; Thalmann, F.; Lee, N.K.; Marques, C.M.; Bibette, J. (2008), Measuring the kinetics of biomolecular recognition with magnetic colloids,Physical Review Letters,100(10) : link

2007

Thalmann, F.; Farago, J. (2007), Trotter derivation of algorithms for Brownian and dissipative particle dynamics,Journal Of Chemical Physics,127(12) : link

Baulin, V.A.; Marques, C.M.; Thalmann, F. (2007), Collision induced spatial organization of microtubules,Biophysical Chemistry,128(2-3) : 231-244 link